brake flush question

[skatanic28]

so i just got my first paycheck for the summer, and already dumped half of it into ST sway bars, hawk HPS pads, ATE fluid, spl ss lines, and some speed bleeders. so all this stuff is gonna be here sometime next week and just wanted to have everything down. im going to be taking off my calipers as well to get rid of the rust and all that fun stuff. so i was just wondering what the best way to go about flushing the system would be. if i just open up all the bleeders and pump all the fluid out, is it ok for the MC cylinder to be empty? then when im done just fill and bleed like normal, but with speed bleeders this time . just wanna make sure im not going to have to bench bleed the MC, cuz i dont really know what that involves.

thanks for any help guys